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Introduction to Jmol Application - English

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    • 1
      Overview of Jmol Application
    • Introduction to Jmol Application
    • 3
      Create and edit molecular models
    • 4
      Modify Display and View
    • 5
      Measurements and Labeling
    • 6
      Interchange the Element in the 3D Model
    • 7
      2D Editor Tool
    • 8
      Script Console and Script Commands
    • 9
      Display Lone Pair of Electrons
    • 10
      Surfaces and Orbitals
    • 11
      Structures from Database
    • 12
      Crystal Structure and Unit Cell
    • 13
      Bond Rotation in Jmol
    • 14
      Superimposing Structures
    • 15
      Proteins and Macromolecules
    • 16
      3D Models of Enzymes
    • 17
      Symmetry and Point Groups
    • 18
      Animation using Script Commands
    • 19
      Simulated NMR Spectrum using Jmol
    • 20
      Creating a Basic JSmol Integrated Web Page
    • 21
      Editing the JSmol Integrated Web Page
  1. Instruction Sheet
  2. Installation Sheet
Outline:
Brief description about Jmol Application. Software requirements. Prerequisites. Open the Jmol Application on Ubuntu/ Linux system. Explain program interface (Menu Bar, Tool bar, Pop-up menu and display area). Change the size of the display area. Create models of simple organic molecules (alkanes) Energy Minimization Save the image as .mol file.

Assignment

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